The recovery of the microbial community after plaque removal depends on periodontal health status


  • Jin, L. & Group, E. Initiator paper. Interprofessional education and multidisciplinary teamwork for prevention and effective management of periodontal disease. J. Int. Acad. Periodontol. 17, 74–79 (2015).

    PubMed 

    Google Scholar 

  • Kassebaum, N. J. et al. Global burden of severe periodontitis in 1990–2010: a systematic review and meta-regression. J. Dent. Res. 93, 1045–1053 (2014).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Global, regional, and national incidence, prevalence, and years lived with disability for 328 diseases and injuries for 195 countries, 1990–2016: a systematic analysis for the Global Burden of Disease Study 2016. Lancet 390, 1211–1259 (2017).

  • Jin, L. J. et al. Global burden of oral diseases: emerging concepts, management and interplay with systemic health. Oral. Dis. 22, 609–619 (2016).

    Article 
    CAS 
    PubMed 

    Google Scholar 

  • Listl, S., Galloway, J., Mossey, P. A. & Marcenes, W. Global economic impact of dental diseases. J. Den. Res. 94, 1355–1361 (2015).

    Article 
    CAS 

    Google Scholar 

  • Hajishengallis, G. Periodontitis: from microbial immune subversion to systemic inflammation. Nat. Rev. Immunol. 15, 30–44 (2015).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Kinane, D. F., Stathopoulou, P. G. & Papapanou, P. N. Periodontal diseases. Nat. Rev. Dis. Prim. 3, 17038 (2017).

    Article 
    PubMed 

    Google Scholar 

  • Page, R. C. & Eke, P. I. Case definitions for use in population-based surveillance of periodontitis. J. Periodontol. 78, 1387–1399, (2007).

    Article 
    PubMed 

    Google Scholar 

  • Conceição, S. D. S. et al. An accuracy study of the clinical diagnosis of periodontitis in pregnant women. J. Periodontol. 92, 1243–1251 (2021).

    Article 
    PubMed 

    Google Scholar 

  • Eke, P. I., Page, R. C., Wei, L., Thornton-Evans, G. & Genco, R. J. Update of the case definitions for population-based surveillance of periodontitis. J. Periodontol. 83, 1449–1454 (2012).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Eke, P. I., Borgnakke, W. S. & Genco, R. J. Recent epidemiologic trends in periodontitis in the USA. Periodontol 2000 82, 257–267 (2020).

    Article 
    PubMed 

    Google Scholar 

  • Abusleme, L. et al. The subgingival microbiome in health and periodontitis and its relationship with community biomass and inflammation. ISME J. 7, 1016–1025 (2013).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Murakami, S., Mealey, B. L., Mariotti, A. & Chapple, I. L. C. Dental plaque-induced gingival conditions. J. Clin. Periodontol. 45, s17–s27 (2018).

    Article 
    CAS 
    PubMed 

    Google Scholar 

  • Carrouel, F., Viennot, S., Santamaria, J., Veber, P. & Bourgeois, D. Quantitative molecular detection of 19 major pathogens in the interdental biofilm of periodontally healthy young adults. Front. Microbiol. 7, 840 (2016).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Nemoto, T. et al. Discrimination of bacterial community structures among healthy, gingivitis, and periodontitis statuses through integrated metatranscriptomic and network analyses. mSystems 6, e0088621 (2021).

    Article 
    PubMed 

    Google Scholar 

  • Addy, M. & Koltai, R. Control of supragingival calculus. scaling and polishing and anticalculus toothpastes: an opinion. J. Clin. Periodontol. 21, 342–346 (1994).

    Article 
    CAS 
    PubMed 

    Google Scholar 

  • Chapple, I. L. et al. Primary prevention of periodontitis: managing gingivitis. J. Clin. Periodontol. 42, S71–S76 (2015).

    Article 
    PubMed 

    Google Scholar 

  • Wang, J., Jia, Z., Zhang, B., Peng, L. & Zhao, F. Tracing the accumulation of in vivo human oral microbiota elucidates microbial community dynamics at the gateway to the GI tract. Gut 69, 1355–1356 (2020).

    Article 
    PubMed 

    Google Scholar 

  • Heller, D. et al. Microbial diversity in the early in vivo-formed dental biofilm. Appl. Environ. Microbiol. 82, 1881–1888 (2016).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Duran-Pinedo, A. et al. Long-term dynamics of the human oral microbiome during clinical disease progression. BMC Biol. 19, 240 (2021).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Liu, G. et al. Shift in the subgingival microbiome following scaling and root planing in generalized aggressive periodontitis. J. Clin. Periodontol. 45, 440–452 (2018).

    Article 
    CAS 
    PubMed 

    Google Scholar 

  • Wei, Y. et al. Comparison of subgingival and buccal mucosa microbiome in chronic and aggressive periodontitis: a pilot study. Front. Cell. Infect. Microbiol. 9, 53 (2019).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Califf, K. J. et al. Multi-omics analysis of periodontal pocket microbial communities pre- and posttreatment. mSystems 2, e00016–e00017 (2017).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Roche, K. E. & Mukherjee, S. The accuracy of absolute differential abundance analysis from relative count data. PLoS Comput. Biol. 18, e1010284 (2022).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Williamson, B. D., Hughes, J. P. & Willis, A. D. A multiview model for relative and absolute microbial abundances. Biometrics 78, 1181–1194 (2022).

    Article 
    CAS 
    PubMed 

    Google Scholar 

  • Beule, L., Arndt, M. & Karlovsky, P. Relative abundances of species or sequence variants can be misleading: soil fungal communities as an example. Microorganisms 9, 589 (2021).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Hall, C. M. et al. Burkholderia thailandensis isolated from the environment, United States. Emerg. Infect. Dis. 29, 618–621 (2023).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Grahn, N., Olofsson, M., Ellnebo-Svedlund, K., Monstein, H. J. & Jonasson, J. Identification of mixed bacterial DNA contamination in broad-range PCR amplification of 16S rDNA V1 and V3 variable regions by pyrosequencing of cloned amplicons. FEMS Microbiol. Lett. 219, 87–91 (2003).

    Article 
    CAS 
    PubMed 

    Google Scholar 

  • Borsanelli, A. C. et al. Microbiomes associated with bovine periodontitis and oral health. Vet. Microbiol. 218, 1–6 (2018).

    Article 
    PubMed 

    Google Scholar 

  • Soriano-Lerma, A. et al. Short-term effects of hyaluronic acid on the subgingival microbiome in peri-implantitis: a randomized controlled clinical trial. J. Periodontol. 91, 734–745 (2020).

    Article 
    CAS 
    PubMed 

    Google Scholar 

  • Morton, J. T. et al. Establishing microbial composition measurement standards with reference frames. Nat. Commun. 10, 2719 (2019).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Fedarko, M. W. et al. Visualizing ‘omic feature rankings and log-ratios using Qurro. NAR Genom. Bioinforma. 2, lqaa023 (2020).

    Article 

    Google Scholar 

  • Baker, J. L. et al. Deep metagenomics examines the oral microbiome during dental caries, revealing novel taxa and co-occurrences with host molecules. Genome Res. 31, 64–74 (2021).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Galazzo, G. et al. How to count our microbes? The effect of different quantitative microbiome profiling approaches. Front. Cell. Infect. Microbiol. 10, 403 (2020).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Haffajee, A. D. et al. Factors affecting human supragingival biofilm composition. II. Tooth position. J. Periodontal. Res. 44, 520–528 (2009).

    Article 
    CAS 
    PubMed 

    Google Scholar 

  • Rosan, B. & Lamont, R. J. Dental plaque formation. Microbes Infect. 2, 1599–1607 (2000).

    Article 
    CAS 
    PubMed 

    Google Scholar 

  • Nobbs, A. H., Lamont, R. J. & Jenkinson, H. F. Streptococcus adherence and colonization. Microbiol Mol. Biol. Rev. 73, 407–450 (2009).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Jiang, Y. et al. Comparison of red-complex bacteria between saliva and subgingival plaque of periodontitis patients: a systematic review and meta-analysis. Front. Cell Infect. Microbiol. 11, 727732 (2021).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Mikkelsen, L., Theilade, E. & Poulsen, K. Abiotrophia species in early dental plaque. Oral. Microbiol. Immunol. 15, 263–268 (2000).

    Article 
    CAS 
    PubMed 

    Google Scholar 

  • Ito, H. O., Soutome, S. & Inoue, M. Inhibition of fibronectin binding of some bacterial cells by subtle pH increase within the physiological range. J. Microbiol. Methods 55, 29–34 (2003).

    Article 
    CAS 
    PubMed 

    Google Scholar 

  • Kanamoto, T., Terakubo, S. & Nakashima, H. Antimicrobial susceptibilities of oral isolates of Abiotrophia and Granulicatella according to the consensus guidelines for fastidious bacteria. Medicines 5, 129 (2018).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Huang, S. et al. Longitudinal Multi-omics and microbiome meta-analysis identify an asymptomatic gingival state that links gingivitis, periodontitis, and aging. mBio 12, e03281–20 (2021).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Pussinen, P. J. et al. Periodontitis and cardiometabolic disorders: the role of lipopolysaccharide and endotoxemia. Periodontol. 2000 89, 19–40 (2022).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Paju, S. et al. Clarithromycin reduces recurrent cardiovascular events in subjects without periodontitis. Atherosclerosis 188, 412–419 (2006).

    Article 
    CAS 
    PubMed 

    Google Scholar 

  • Pussinen, P. J. et al. Severe periodontitis enhances macrophage activation via increased serum lipopolysaccharide. Arterioscler Thromb. Vasc. Biol. 24, 2174–2180 (2004).

    Article 
    CAS 
    PubMed 

    Google Scholar 

  • Zhou, L. J. et al. Periodontitis exacerbates atherosclerosis through Fusobacterium nucleatum-promoted hepatic glycolysis and lipogenesis. Cardiovasc. Res. 119, 1706–1717 (2023).

    Article 
    CAS 
    PubMed 

    Google Scholar 

  • Abusleme, L. & Moutsopoulos, N. M. IL-17: overview and role in oral immunity and microbiome. Oral. Dis. 23, 854–865 (2017).

    Article 
    CAS 
    PubMed 

    Google Scholar 

  • Graves, D. T., Corrêa, J. D. & Silva, T. A. The oral microbiota is modified by systemic diseases. J. Dent. Res. 98, 148–156 (2019).

    Article 
    CAS 
    PubMed 

    Google Scholar 

  • Manor, O. et al. Health and disease markers correlate with gut microbiome composition across thousands of people. Nat. Commun. 11, 5206 (2020).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Heo, H., Bae, J. H., Amano, A., Park, T. & Choi, Y. H. Supplemental or dietary intake of omega-3 fatty acids for the treatment of periodontitis: a meta-analysis. J. Clin. Periodontol. 49, 362–377 (2022).

    Article 
    CAS 
    PubMed 

    Google Scholar 

  • Bhardwaj, R. G., Al-Khabbaz, A. & Karched, M. Cytokine induction of peripheral blood mononuclear cells by biofilms andbiofilm supernatants of Granulicatella and Abiotrophia spp. Micro. Pathog. 114, 90–94 (2018).

    Article 
    CAS 

    Google Scholar 

  • Buduneli, N. Environmental factors and periodontal microbiome. Periodontol. 2000 85, 112–125 (2021).

    Article 
    PubMed 

    Google Scholar 

  • Altun, E. et al. Association between dietary pattern and periodontitis-a cross-sectional study. Nutrients 13, 4167 (2021).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Kato, I. et al. Nutritional correlates of human oral microbiome. J. Am. Coll. Nutr. 36, 88–98 (2017).

    Article 
    CAS 
    PubMed 

    Google Scholar 

  • Ottosson, F. et al. The inverse association between a fish consumption biomarker and gingival inflammation and periodontitis: a population-based study. J. Clin. Periodontol. 49, 353–361 (2022).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Tekce, M. et al. Clinical and microbiological effects of probiotic lozenges in the treatment of chronic periodontitis: a 1-year follow-up study. J. Clin. Periodontol. 42, 363–372 (2015).

    Article 
    PubMed 

    Google Scholar 

  • Mulhall, H., DiChiara, J. M., Huck, O. & Amar, S. Pasteurized Akkermansia muciniphila reduces periodontal and systemic inflammation induced by Porphyromonas gingivalis in lean and obese mice. J. Clin. Periodontol. 49, 717–729 (2022).

    Article 
    CAS 
    PubMed 

    Google Scholar 

  • Murakami, S., Mealey, B. L., Mariotti, A. & Chapple, I. L. C. Dental plaque-induced gingival conditions. J. Periodontol. 89, S17–S27 (2018).

    PubMed 

    Google Scholar 

  • Roggenkamp, A., Leitritz, L., Baus, K., Falsen, E. & Heesemann, J. PCR for detection and identification of Abiotrophia spp. J. Clin. Microbiol. 36, 2844–2846 (1998).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Snider, E. J. et al. Barrett’s esophagus is associated with a distinct oral microbiome. Clin. Transl. Gastroenterol. 9, 135 (2018).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Sun, B., Zhou, D., Tu, J. & Lu, Z. Evaluation of the bacterial diversity in the human tongue coating based on genus-specific primers for 16S rRNA sequencing. BioMed. Res. Int. 2017, 8184160 (2017).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Bolyen, E. et al. Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2. Nat. Biotechnol. 37, 852–857 (2019).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Callahan, B. J. et al. DADA2: high-resolution sample inference from Illumina amplicon data. Nat. Methods 13, 581–583 (2016).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 



  • Source link

    Leave a Reply

    Your email address will not be published. Required fields are marked *